分子生物学
IVD分子诊断
细胞培养与分析
蛋白研究
细胞因子
重组蛋白
抗体
高通量测序建库
病原检测UCF系列
生物医药
工具酶
抑制剂激活剂与常用试剂
仪器
耗材

Roseibium aestuarii sp. nov., isolated from Pearl River Estuary

Li Duan, Jia-ling Li, Xin Li, Lei Dong, Bao-Zhu Fang, Min Xiao, Xiaozhen Mou, Wen-Jun Li

Journal:INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

IF:2.42

DOI:10.1099/ijsem.0.004116

PMID:32209167

Published:2020-03-25

research field:分类学微生物学基因组学

Abstract

A novel bacterium, designated strain SYSU M00256-3T, was isolated from a water sample collected from Pearl River Estuary at Guangzhou, PR China. Its taxonomic position was determined by using a polyphasic approach. Cells of the strain were Gram-staining-negative, motile, aerobic and rod-shaped with peritrichous flagella. It could grow at 15–45 °C, pH 4.0–10.0 and in the presence of 0–7.5 % (w/v) NaCl. The chemotaxonomic features of strain SYSU M00256-3Tincluded ubiquinone-10 (Q-10) as the sole respiratory quinone; phosphatidylcholine, phosphatidylmethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified phospholipid as major polar lipids; summed feature 8 (C18 : 1ω7cand C18 : 1ω6c) as the predominant fatty acids (>70 %). On the basis of 16S rRNA gene sequence analysis, strain SYSU M00256-3Twas most closely related to the type strains ofRoseibium hamelinenseCGMCC 1.12584T(97.7 %) andR. aquaeCGMCC 1.12426T(97.2 %),R. sediminisKCTC 52373T(96.7 %),R. denhamenseCGMCC 1.12583T(96.4 %). The average nucleotide identity (ANI) values betweenR. aestuariiSYSU M00256-3TandR. hamelinenseCGMCC 1.12584T,R. aquaeCGMCC 1.12426T,R. denhamenseCGMCC 1.12583TandR. sediminisKCTC 52373Twere 78.0, 78.2, 77.7 and 78.8, and the dDDH value is 20.0, 20.8, 20.1 and 20.6 correspondingly. Based on the analyses of the phenotypic, genotypic and phylogenetic characteristics, strain SYSU M00256-3Tis characterized to represent a novel species of the genusRoseibium, for which the nameRoseibium aestuariisp. nov. is proposed. The type strain is SYSU M00256-3T(=NBRC 112946T=CGMCC 1.16156T).

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